STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_8625hlyD family secretion protein. (375 aa)    
Predicted Functional Partners:
LDG_8623
Export ABC transporter permease protein.
 
    0.972
LDG_8624
Export ABC transporter ATP-binding protein / export ABC transporter permease protein.
 
  
 0.960
LDG_8626
Putative outer membrane transport protein involved in copper (silver) tolerance (cusC).
 
 0.835
LDG_7601
ABC-2 type transporter.
 
  
 0.798
LDG_7602
ABC transporter ATP-binding protein.
 
    0.784
LDG_5118
Hypothetical protein.
 
  
 0.766
LDG_5410
ABC transporter, permease.
 
  
 0.723
LDG_5413
Outer membrane efflux protein.
  
  0.580
LDG_5119
Hypothetical protein.
  
  0.534
LDG_6923
Outer membrane protein TolC.
  
  0.534
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.