STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_8748Glycosyl transferase, group 1. (376 aa)    
Predicted Functional Partners:
LDG_8745
Hypothetical protein; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.823
LDG_8802
Hypothetical protein.
     
 0.787
LDG_8013
Hypothetical protein.
  
 0.773
LDG_5087
Hypothetical protein.
  
     0.763
LDG_5088
Hypothetical protein.
 
 
 0.756
LDG_5089
Hypothetical protein.
  
     0.739
LDG_5093
Hypothetical protein.
 
  
 0.721
LDG_5092
Hypothetical protein.
  
     0.684
LDG_5328
Nucleotide sugar dehydrogenase.
 
  
 0.680
LDG_8741
Hypothetical protein.
 
 
 0.660
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.