Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1645_881544Ubiquitin-conjugating enzyme. (108 aa)    
Predicted Functional Partners:
C1645_752546
HECT domain-containing protein.
    
 0.944
C1645_819181
Ubiquitin-activating emzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.792
C1645_175939
Ubiquitin-conjugating enzyme/RWD-like protein.
   
 0.789
C1645_796379
Anaphase-promoting complex subunit Apc11.
    
 0.773
C1645_772998
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.766
C1645_749640
RING-type domain-containing protein.
    
 0.762
C1645_689135
STIP1 homology and U box-containing protein 1-like protein.
    
 0.718
C1645_749029
Ubiquitin elongating factor core-domain-containing protein.
    
 0.706
C1645_769535
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.676
C1645_795773
Uncharacterized protein.
    
 0.676
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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