STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_835979RNase H domain-containing protein. (448 aa)    
Predicted Functional Partners:
C1645_777448
Uncharacterized protein.
    
 0.530
C1645_724298
60S ribosomal protein L21-A.
   
   0.513
C1645_811556
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
  0.510
C1645_731024
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.503
C1645_691769
Cytosolic 60S large ribosomal protein L39.
   
   0.478
C1645_797297
50S ribosomal protein L13.
   
   0.475
C1645_751638
Eukaryotic porin/Tom40.
    
  0.466
C1645_836711
50S ribosomal protein L2.
   
 
 0.455
C1645_756624
Translation protein SH3-like domain-containing protein.
   
 
 0.455
C1645_708172
60S ribosomal protein L2.
   
 
 0.455
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.