STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_833342Arginase/deacetylase. (362 aa)    
Predicted Functional Partners:
C1645_755050
WD40-repeat-containing domain protein.
   
 0.842
C1645_817540
WD40-repeat-containing domain protein.
   
 0.842
C1645_755119
Uncharacterized protein.
    
 0.829
C1645_776535
HDAC_interact domain-containing protein.
    
 0.797
C1645_698674
Histone H2B; Belongs to the histone H2B family.
    
 0.782
C1645_764774
Histone H2B; Belongs to the histone H2B family.
    
 0.782
C1645_764731
Histone H2B; Belongs to the histone H2B family.
    
 0.782
C1645_752738
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.775
C1645_746411
HSF-type DNA-binding-domain-containing protein.
    
 0.764
C1645_676245
Putative two-component response regulator.
    
 0.764
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.