STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_742614Translocation protein Sec62-domain-containing protein. (262 aa)    
Predicted Functional Partners:
C1645_694640
Sec63 Brl domain-containing protein.
   
 0.999
C1645_743384
Pre protein translocase subunit Sec66-domain-containing protein.
    
 
 0.993
C1645_727866
Uncharacterized protein.
    
 
 0.993
C1645_62473
TPR_REGION domain-containing protein.
    
 
 0.993
C1645_869948
Plug_translocon domain-containing protein.
   
 
 0.993
C1645_769308
Protein transport protein Sec61 subunit beta.
    
 
 0.962
C1645_753486
Kinase-like domain-containing protein.
    
 
 0.949
C1645_813796
Sec63 Brl domain-containing protein.
     
 0.852
C1645_822630
Sec63 Brl domain-containing protein.
     
 0.774
C1645_760135
Microsomal signal peptidase 25 kDa subunit-domain-containing protein.
    
 
 0.714
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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