STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_350770Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
C1645_242941
Uncharacterized protein.
    
 0.915
C1645_832310
Integrator complex subunit 2-domain-containing protein.
    
 0.913
C1645_875396
Beta-lactamase-like protein.
   
 0.913
C1645_879079
Uncharacterized protein.
    
 0.912
C1645_758755
Armadillo-type protein.
    
 0.912
C1645_330318
Uncharacterized protein.
    
 0.907
C1645_689097
RNA polymerase Rpb5, C-terminal domain-containing protein.
    
  0.863
C1645_174083
RNA polymerase.
    
  0.863
C1645_783031
DNA-directed RNA polymerase alpha subunit.
    
  0.860
C1645_873043
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.850
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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