STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_698259TIP41-like family-domain-containing protein. (258 aa)    
Predicted Functional Partners:
C1645_741967
TAP42-like protein.
    
 0.902
C1645_795304
Serine/threonine-protein phosphatase.
    
 
 0.838
C1645_777619
Serine/threonine-protein phosphatase.
    
 
 0.796
C1645_797834
Succinate-semialdehyde dehydrogenase.
     
 0.749
C1645_752696
Metallo-dependent phosphatase-like protein.
    
 
 0.742
C1645_753837
Putative ser/thr protein phosphatase 2A regulatory subunit A.
    
 
 0.710
C1645_749172
Serine/threonine-protein phosphatase.
   
 
 0.637
C1645_824813
Serine/threonine-protein phosphatase.
    
 
 0.600
C1645_697002
Cytochrome C oxidase assembly protein cox15.
    
 0.577
C1645_757129
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.574
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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