STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_320152JmjC domain-containing protein. (535 aa)    
Predicted Functional Partners:
C1645_768535
Uncharacterized protein.
    
 0.773
C1645_710196
Uncharacterized protein.
   
 
 0.767
C1645_749049
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.766
C1645_576186
Uncharacterized protein.
     
 0.749
C1645_40884
GATA-type domain-containing protein.
    
 0.719
C1645_670940
Uncharacterized protein.
    
 0.719
C1645_878718
SWIB domain-containing protein.
     
 0.681
C1645_763431
Actin family.
     
 0.680
C1645_707264
Actin-related protein; Belongs to the actin family.
     
 0.680
C1645_689932
GATA-type domain-containing protein.
    
 0.649
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.