STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_829596Uncharacterized protein. (687 aa)    
Predicted Functional Partners:
C1645_817583
Pyridoxal phosphate-dependent transferase.
   
 0.579
C1645_765276
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.560
C1645_835872
Uncharacterized protein.
  
 
  0.527
C1645_660658
Class I glutamine amidotransferase-like protein.
  
 
 0.518
C1645_685627
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
    
 0.518
C1645_695403
FAD-binding PCMH-type domain-containing protein.
  
 0.510
C1645_718740
Malate synthase; Belongs to the malate synthase family.
   
 
 0.507
C1645_824196
Uncharacterized protein.
    
 0.494
C1645_840704
Thiolase-like protein.
   
 
 0.478
C1645_702622
Thiolase-like protein.
   
 
 0.478
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.