STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_741947Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
C1645_684831
BTB/POZ protein; Belongs to the SKP1 family.
    
  0.493
C1645_684799
BTB/POZ protein; Belongs to the SKP1 family.
    
  0.493
C1645_754898
Cullin 1a; Belongs to the cullin family.
    
  0.492
C1645_875217
Uncharacterized protein.
    
  0.490
C1645_749640
RING-type domain-containing protein.
    
  0.486
C1645_776494
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
    
  0.412
C1645_702577
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
  0.407
C1645_783873
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
  0.407
C1645_760008
Ribosomal protein L24e-domain-containing protein.
    
  0.407
C1645_820565
Ribosomal protein L18e/L15P; Belongs to the universal ribosomal protein uL15 family.
    
  0.407
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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