STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_826344Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
C1645_799707
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.944
C1645_781400
Mitochondrial 39-S ribosomal protein L47 (MRP-L47)-domain-containing protein.
    
   0.923
C1645_691107
39S mitochondrial ribosomal protein L46-domain-containing protein.
    
   0.923
C1645_753310
Thioredoxin-like protein.
    
   0.923
C1645_731381
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
  
  
 0.856
C1645_794647
Rhodanese-like domain-containing protein.
   
   0.851
C1645_47490
Sulfurtransferase.
   
   0.851
C1645_406635
Uncharacterized protein.
    
   0.847
C1645_783592
Mitochondrial ribosomal death-associated protein 3-domain-containing protein.
    
   0.847
C1645_816196
AKAP7 2'5' RNA ligase-like domain-containing protein.
    
   0.847
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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