STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_826344Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
C1645_731381
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
  
  
 0.775
C1645_799707
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.746
C1645_755424
Beta-lactamase-like protein.
   
 
 0.714
C1645_711495
Ribosomal protein S17-domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.685
C1645_685440
30S ribosomal protein S17.
   
 
 0.685
C1645_706782
Translation protein SH3-like domain-containing protein.
   
 
 0.662
C1645_685790
KOW domain-containing protein.
   
 
 0.662
C1645_689758
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.658
C1645_755896
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.658
C1645_797297
50S ribosomal protein L13.
  
 
 0.643
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.