STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_829455GPI biosynthesis protein family Pig-F-domain-containing protein. (265 aa)    
Predicted Functional Partners:
C1645_700940
Uncharacterized protein.
    
 0.807
C1645_819939
Mannosyltransferase.
     
 0.781
C1645_730030
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.777
C1645_801110
Alkaline-phosphatase-like protein.
    
 0.766
C1645_752237
GPI transamidase component PIG-T.
     
 0.740
C1645_721328
Phosphatidylinositol-glycan biosynthesis class S protein.
     
 0.722
C1645_761261
Gaa1-like protein.
     
 0.717
C1645_702542
GPI transamidase subunit PIG-U.
     
 0.692
C1645_821181
Uncharacterized protein.
    
 0.608
C1645_711040
Phosphatidylinositolglycan class N-domain-containing protein.
    
 0.608
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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