STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_828262P-loop containing nucleoside triphosphate hydrolase protein. (1630 aa)    
Predicted Functional Partners:
C1645_125565
Ubiquitin carboxyl-terminal hydrolase.
    
  0.621
C1645_741163
Uncharacterized protein.
   
 0.617
C1645_877018
RING-type domain-containing protein.
    
 0.586
C1645_770197
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.562
C1645_755768
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.559
C1645_813153
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.559
C1645_811881
USP domain-containing protein.
    
  0.555
C1645_249267
Ras guanine nucleotide exchange factor domain-containing protein.
    
 0.550
C1645_791881
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.548
C1645_731144
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.546
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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