STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_782210WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family. (297 aa)    
Predicted Functional Partners:
C1645_773956
WD_REPEATS_REGION domain-containing protein.
    
 0.999
C1645_821532
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
    
 0.999
C1645_761908
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.999
C1645_756288
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
C1645_813798
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
0.999
C1645_778580
Zinc_ribbon_16 domain-containing protein.
    
 0.998
C1645_825187
WD40-repeat-containing domain protein.
    
 0.998
C1645_722688
Uncharacterized protein.
    
 0.998
C1645_700035
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.997
C1645_817158
WD40-repeat-containing domain protein.
   
 0.997
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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