STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_773911HMG box domain-containing protein. (215 aa)    
Predicted Functional Partners:
C1645_781396
Uracil phosphoribosyltransferase-domain-containing protein.
    
 0.876
C1645_758725
Uracil phosphoribosyltransferase.
    
 0.876
C1645_749082
Uridine kinase; Belongs to the uridine kinase family.
    
 0.876
C1645_880039
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.858
C1645_807825
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.858
C1645_700574
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.770
C1645_773039
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.704
C1645_533001
Uncharacterized protein.
     
 0.685
C1645_782812
Uncharacterized protein.
    
 0.678
C1645_871468
CENP-A-nucleosome distal centromere subunit, CENP-P-domain-containing protein.
    
 0.678
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.