Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1645_827117Cation efflux family-domain-containing protein. (473 aa)    
Predicted Functional Partners:
C1645_701748
Alkaline-phosphatase-like protein.
    
  0.648
C1645_737275
Flavokinase domain-containing protein.
     
  0.602
C1645_732556
Uncharacterized protein; Belongs to the phosphohexose mutase family.
    
  0.584
C1645_758743
ZIP zinc transporter-domain-containing protein.
  
 0.579
C1645_728820
Alpha/Beta hydrolase protein.
    
  0.560
C1645_821206
HAD-like domain-containing protein.
    
  0.541
C1645_831004
Phosphoribosyltransferase-like protein.
     
  0.501
C1645_823631
Ribose-phosphate pyrophosphokinase 3.
     
  0.501
C1645_754806
Phosphoribosyltransferase-like protein.
     
  0.501
C1645_294649
HAD-like domain-containing protein.
     
  0.496
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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