STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_776923Man1-Src1p-C-terminal domain-containing protein. (604 aa)    
Predicted Functional Partners:
C1645_872613
Phorbol-ester/DAG-type domain-containing protein.
    
 0.849
C1645_739918
Snf7-domain-containing protein.
    
 0.840
C1645_713228
Snf7 family.
    
 0.764
C1645_707455
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.706
C1645_748198
Armadillo-type protein.
    
 
 0.706
C1645_873144
Uncharacterized protein.
    
 0.697
C1645_761908
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.651
C1645_688090
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
  0.641
C1645_802128
WD40-repeat-containing domain protein.
    
 0.612
C1645_821532
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
    
 0.611
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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