STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_828875Ribosome biogenesis protein RPF2. (321 aa)    
Predicted Functional Partners:
C1645_811883
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.999
C1645_733929
RRM domain-containing protein.
   
 
 0.998
C1645_790511
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.997
C1645_778544
Ribosomal L24 domain-containing 1.
   
 
 0.997
C1645_684024
GTP binding protein 4.
   
 
 0.997
C1645_754022
Ribosomal protein L1p/L10e family-domain-containing protein.
   
 
 0.997
C1645_795936
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 
 0.997
C1645_768768
Ribosomal protein L10-domain-containing protein.
   
 
 0.996
C1645_872467
Noc2p family-domain-containing protein.
   
 
 0.996
C1645_798402
Guanine nucleotide-binding protein-like 3.
   
 
 0.996
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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