STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_233386RRM domain-containing protein. (133 aa)    
Predicted Functional Partners:
C1645_773804
WD40-repeat-containing domain protein.
    
 0.999
C1645_768005
Pre-mRNA splicing factor SYF1.
   
 0.999
C1645_685213
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.996
C1645_820621
Uncharacterized protein.
   
 0.995
C1645_148636
SKIP/SNW domain-containing protein.
   
 0.994
C1645_796126
Maternal g10 transcript.
   
 0.994
C1645_747778
Uncharacterized protein.
   
 0.993
C1645_801851
Uncharacterized protein.
    
 0.983
C1645_753616
Isy1-like splicing factor.
   
  0.977
C1645_750119
CwfJ C-terminus 1-domain-containing protein-like protein.
    
  0.949
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.