Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1645_806410Uncharacterized protein. (903 aa)    
Predicted Functional Partners:
C1645_678657
Oxidoreductase, molybdopterin-binding domain-containing protein.
    
  0.808
C1645_692075
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.808
C1645_811556
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
  0.806
C1645_777448
Uncharacterized protein.
    
  0.558
C1645_709313
DRIM domain-containing protein.
   
 
  0.475
C1645_763698
Peptide hydrolase; Belongs to the peptidase M28 family.
  
 0.472
C1645_756663
WD40-repeat-containing domain protein.
    
  0.444
C1645_815211
WD40-repeat-containing domain protein.
    
  0.443
C1645_746998
Quinon protein alcohol dehydrogenase-like superfamily.
    
  0.443
C1645_741451
Uncharacterized protein.
    
  0.418
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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