Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1645_775882Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
C1645_792940
Uncharacterized protein.
    
 0.951
C1645_752546
HECT domain-containing protein.
   
  0.941
C1645_768671
Ribosomal protein L5 domain-containing protein; Belongs to the universal ribosomal protein uL5 family.
   
 0.917
C1645_760008
Ribosomal protein L24e-domain-containing protein.
   
 0.917
C1645_785784
60S ribosomal protein L34-B.
   
 0.916
C1645_765731
Ribosomal L38e protein family-domain-containing protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.916
C1645_691623
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.916
C1645_763212
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.916
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.915
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.914
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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