Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1645_855003Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
C1645_780269
Insulin-like growth factor binding protein.
    
 0.833
C1645_754953
ASF1 like histone chaperone-domain-containing protein.
    
 0.598
C1645_687851
Ribosomal protein S19-domain-containing protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.550
C1645_766077
Ribosomal protein S28e.
   
   0.543
C1645_750183
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.543
C1645_824883
Actin family; Belongs to the actin family.
    
  0.536
C1645_576186
Uncharacterized protein.
    
  0.525
C1645_768101
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.508
C1645_748354
GLE1-like protein.
    
  0.507
C1645_711495
Ribosomal protein S17-domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
   0.489
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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