STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_737992C2 domain-containing protein. (125 aa)    
Predicted Functional Partners:
C1645_741163
Uncharacterized protein.
    
 0.866
C1645_819865
Lysophospholipase.
    
  0.861
C1645_762201
WD40-repeat-containing domain protein.
   
 0.823
C1645_736398
Kinase-like domain-containing protein.
    
 0.816
C1645_871336
Uncharacterized protein.
    
  0.812
C1645_689682
Phosphoinositide phospholipase C.
    
 0.804
C1645_277146
Ankyrin repeat-containing domain protein.
   
 0.786
C1645_776035
Protein kinase domain-containing protein.
    
 0.771
C1645_752805
BZIP domain-containing protein.
   
 
 0.764
C1645_782203
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
     
  0.755
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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