Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1645_770197Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (259 aa)    
Predicted Functional Partners:
C1645_738380
Glucosidase II beta subunit-like protein.
   
 0.985
C1645_755768
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.976
C1645_813153
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.976
C1645_737487
TPR_REGION domain-containing protein.
   
 0.969
C1645_754933
Polyubiquitin-tagged protein recognition complex Npl4 component.
    
 
 0.958
C1645_696591
Ubiquitin fusion degradation protein UFD1.
    
 
 0.957
C1645_383499
Uncharacterized protein.
    
 0.947
C1645_687801
RING-type domain-containing protein.
    
 0.947
C1645_780263
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.937
C1645_777896
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.937
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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