STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1645_688542Ubiquitin family-domain-containing protein. (91 aa)    
Predicted Functional Partners:
C1645_743937
Uncharacterized protein.
    
 0.987
C1645_792940
Uncharacterized protein.
   
 0.857
C1645_763212
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.856
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.854
C1645_768101
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.853
C1645_752546
HECT domain-containing protein.
   
 0.849
C1645_777772
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.843
C1645_731947
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.842
C1645_766077
Ribosomal protein S28e.
   
 0.836
C1645_756333
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.836
Your Current Organism:
Glomus cerebriforme
NCBI taxonomy Id: 658196
Other names: ADW 16899, G. cerebriforme
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.