Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1645_279501 | C1645_687700 | A0A397TRQ4 | A0A397TEB2 | P68 RNA helicase; Belongs to the DEAD box helicase family. | RNA helicase. | 0.832 |
C1645_279501 | C1645_701108 | A0A397TRQ4 | A0A397S3S9 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Pseudouridine synthase. | 0.836 |
C1645_279501 | C1645_720094 | A0A397TRQ4 | A0A397TG38 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Pescadillo N-terminus-domain-containing protein. | 0.849 |
C1645_279501 | C1645_753491 | A0A397TRQ4 | A0A397TI68 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.849 |
C1645_279501 | C1645_773093 | A0A397TRQ4 | A0A397SW22 | P68 RNA helicase; Belongs to the DEAD box helicase family. | RRM domain-containing protein. | 0.844 |
C1645_279501 | C1645_798402 | A0A397TRQ4 | A0A397TSF5 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Guanine nucleotide-binding protein-like 3. | 0.874 |
C1645_279501 | C1645_811193 | A0A397TRQ4 | A0A397TN49 | P68 RNA helicase; Belongs to the DEAD box helicase family. | RRM domain-containing protein. | 0.844 |
C1645_279501 | C1645_823123 | A0A397TRQ4 | A0A397SZW4 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Fibrillarin-domain-containing protein. | 0.842 |
C1645_279501 | ERB1 | A0A397TRQ4 | A0A397TNR0 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.860 |
C1645_279501 | YTM1 | A0A397TRQ4 | A0A397TGN0 | P68 RNA helicase; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.835 |
C1645_687700 | C1645_279501 | A0A397TEB2 | A0A397TRQ4 | RNA helicase. | P68 RNA helicase; Belongs to the DEAD box helicase family. | 0.832 |
C1645_687700 | C1645_701108 | A0A397TEB2 | A0A397S3S9 | RNA helicase. | Pseudouridine synthase. | 0.983 |
C1645_687700 | C1645_720094 | A0A397TEB2 | A0A397TG38 | RNA helicase. | Pescadillo N-terminus-domain-containing protein. | 0.988 |
C1645_687700 | C1645_753491 | A0A397TEB2 | A0A397TI68 | RNA helicase. | Uncharacterized protein. | 0.988 |
C1645_687700 | C1645_773093 | A0A397TEB2 | A0A397SW22 | RNA helicase. | RRM domain-containing protein. | 0.587 |
C1645_687700 | C1645_798402 | A0A397TEB2 | A0A397TSF5 | RNA helicase. | Guanine nucleotide-binding protein-like 3. | 0.998 |
C1645_687700 | C1645_811193 | A0A397TEB2 | A0A397TN49 | RNA helicase. | RRM domain-containing protein. | 0.587 |
C1645_687700 | C1645_823123 | A0A397TEB2 | A0A397SZW4 | RNA helicase. | Fibrillarin-domain-containing protein. | 0.896 |
C1645_687700 | ERB1 | A0A397TEB2 | A0A397TNR0 | RNA helicase. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
C1645_687700 | YTM1 | A0A397TEB2 | A0A397TGN0 | RNA helicase. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
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