STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ75962.1Uncharacterized membrane protein HdeD, DUF308 family. (173 aa)    
Predicted Functional Partners:
SDZ76145.1
Acid stress chaperone HdeA.
   
  
 0.854
SEA08147.1
Putative Mg2+ transporter-C (MgtC) family protein.
  
  
 0.610
SEA14878.1
Putative Mg2+ transporter-C (MgtC) family protein.
  
  
 0.610
SDZ75972.1
Serine aminopeptidase, S33.
 
     0.574
SEA46378.1
L,D-transpeptidase catalytic domain.
  
     0.432
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
       0.414
SDZ75926.1
ABC-2 type transport system ATP-binding protein.
       0.412
SDZ75934.1
ABC-2 type transport system permease protein.
       0.412
Your Current Organism:
Microbulbifer marinus
NCBI taxonomy Id: 658218
Other names: CGMCC 1.10657, JCM 17211, Microbulbifer marinus Zhang et al. 2012, Microbulbifer sp. Y215, strain Y215
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.