STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ84701.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
SDZ84745.1
Hypothetical protein.
 
     0.837
SDZ84757.1
Predicted NAD/FAD-binding protein.
 
     0.822
SDZ84729.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.821
SDZ84717.1
Protein of unknown function.
       0.794
SDZ84772.1
Short-chain dehydrogenase.
       0.794
SDZ84786.1
SnoaL-like domain-containing protein.
       0.788
SDZ78417.1
Chromosome segregation ATPase.
  
     0.624
SDZ98732.1
Hypothetical protein.
  
     0.537
SDZ84690.1
Hypothetical protein.
       0.462
SEA51443.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Microbulbifer marinus
NCBI taxonomy Id: 658218
Other names: CGMCC 1.10657, JCM 17211, Microbulbifer marinus Zhang et al. 2012, Microbulbifer sp. Y215, strain Y215
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.