STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA09681.1Hypothetical protein. (298 aa)    
Predicted Functional Partners:
SDZ86607.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.776
SEA09642.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.775
SEA09463.1
Glycosyl transferases group 1.
 
     0.650
SEA09661.1
PhoP regulatory network protein YrbL.
 
     0.544
SEA36303.1
Phospholipase/lecithinase/hemolysin.
  
     0.460
SEA09701.1
UDPglucose 6-dehydrogenase.
       0.436
SDZ76233.1
Proline 4-hydroxylase (includes Rps23 Pro-64 3,4-dihydroxylase Tpa1), contains SM-20 domain.
 
     0.417
SEA43232.1
Hypothetical protein.
  
     0.412
SEA14221.1
2OG-Fe(II) oxygenase superfamily protein.
 
     0.400
Your Current Organism:
Microbulbifer marinus
NCBI taxonomy Id: 658218
Other names: CGMCC 1.10657, JCM 17211, Microbulbifer marinus Zhang et al. 2012, Microbulbifer sp. Y215, strain Y215
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.