Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ75041.1 | SEA13015.1 | SAMN05216562_0012 | SAMN05216562_1878 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Peroxiredoxin, Ohr subfamily. | 0.463 |
SEA12995.1 | SEA13015.1 | SAMN05216562_1877 | SAMN05216562_1878 | Phytoene dehydrogenase-related protein. | Peroxiredoxin, Ohr subfamily. | 0.488 |
SEA13015.1 | SDZ75041.1 | SAMN05216562_1878 | SAMN05216562_0012 | Peroxiredoxin, Ohr subfamily. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.463 |
SEA13015.1 | SEA12995.1 | SAMN05216562_1878 | SAMN05216562_1877 | Peroxiredoxin, Ohr subfamily. | Phytoene dehydrogenase-related protein. | 0.488 |
SEA13015.1 | SEA37905.1 | SAMN05216562_1878 | SAMN05216562_2926 | Peroxiredoxin, Ohr subfamily. | DNA-binding transcriptional regulator, MarR family. | 0.935 |
SEA13015.1 | SEA40636.1 | SAMN05216562_1878 | SAMN05216562_2947 | Peroxiredoxin, Ohr subfamily. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.459 |
SEA37905.1 | SEA13015.1 | SAMN05216562_2926 | SAMN05216562_1878 | DNA-binding transcriptional regulator, MarR family. | Peroxiredoxin, Ohr subfamily. | 0.935 |
SEA40636.1 | SEA13015.1 | SAMN05216562_2947 | SAMN05216562_1878 | Diguanylate cyclase (GGDEF) domain-containing protein. | Peroxiredoxin, Ohr subfamily. | 0.459 |