STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ90952.1TonB family C-terminal domain-containing protein. (457 aa)    
Predicted Functional Partners:
SDJ90981.1
Biopolymer transport protein ExbD; Manually curated.
 
   0.978
SDJ91003.1
Biopolymer transport protein ExbD.
 
   0.978
SDJ91030.1
Outer membrane transport energization protein ExbB.
 
   0.969
SDJ91132.1
Tetratricopeptide repeat-containing protein.
 
 
   0.875
SDJ91106.1
Tetratricopeptide repeat-containing protein.
 
     0.870
SDJ91154.1
Hypothetical protein.
 
     0.866
SDJ91082.1
Tfp pilus assembly protein PilF.
 
     0.855
SDJ90926.1
Conserved repeat domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein.
  
  
  0.736
SDK56123.1
Tetratricopeptide repeat-containing protein.
  
     0.711
SDJ70954.1
Biopolymer transport protein ExbB/TolQ.
  
   0.659
Your Current Organism:
Microbulbifer yueqingensis
NCBI taxonomy Id: 658219
Other names: CGMCC 1.10658, JCM 17212, M. yueqingensis, Microbulbifer sp. Y226, Microbulbifer yueqingensis Zhang et al. 2012, strain Y226
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