STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ96544.1Iron complex transport system substrate-binding protein. (279 aa)    
Predicted Functional Partners:
SDJ96483.1
Iron complex transport system ATP-binding protein.
 
 0.999
SDJ96514.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
SDJ96458.1
Vitamin B12 transporter.
 
  
 0.744
SDK16389.1
Iron complex outermembrane recepter protein.
 
  
 0.600
SDJ71851.1
High-affinity iron transporter.
   
  
 0.583
SDK45023.1
High-affinity iron transporter.
   
  
 0.583
SDK17568.1
Iron complex outermembrane recepter protein.
 
  
 0.573
cysG
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
     
 0.548
SDJ67992.1
Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.543
SDJ55462.1
Family of unknown function.
  
     0.525
Your Current Organism:
Microbulbifer yueqingensis
NCBI taxonomy Id: 658219
Other names: CGMCC 1.10658, JCM 17212, M. yueqingensis, Microbulbifer sp. Y226, Microbulbifer yueqingensis Zhang et al. 2012, strain Y226
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