STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ97618.1Membrane fusion protein, multidrug efflux system. (369 aa)    
Predicted Functional Partners:
SDJ97585.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
 
 
 0.987
SDK28887.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.941
SDJ97658.1
DNA-binding transcriptional regulator, MarR family.
 
  
 0.898
SDK71469.1
Outer membrane protein, adhesin transport system; Manually curated.
 
 0.897
SDJ99873.1
Outer membrane protein.
 
 0.814
SDK19213.1
Multidrug efflux pump.
 
  
 0.652
SDK80665.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.640
SDK19263.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.635
SDK50888.1
Colicin V processing peptidase. Cysteine peptidase. MEROPS family C39.
  
 0.635
SDK71502.1
ATP-binding cassette, subfamily C, LapB.
  
 0.635
Your Current Organism:
Microbulbifer yueqingensis
NCBI taxonomy Id: 658219
Other names: CGMCC 1.10658, JCM 17212, M. yueqingensis, Microbulbifer sp. Y226, Microbulbifer yueqingensis Zhang et al. 2012, strain Y226
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