STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK12767.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (274 aa)    
Predicted Functional Partners:
SDK57220.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.830
SDK13356.1
Citronellol/citronellal dehydrogenase.
  
 
  0.730
SDK51168.1
Pteridine reductase.
  
 
  0.713
SDK27211.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.673
SDJ53328.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.589
SDK12827.1
Hypothetical protein.
 
 
   0.559
SDK12068.1
Short-chain dehydrogenase.
 
     0.515
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 
 0.489
SDJ51896.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.480
SDK12800.1
Hypothetical protein.
       0.464
Your Current Organism:
Microbulbifer yueqingensis
NCBI taxonomy Id: 658219
Other names: CGMCC 1.10658, JCM 17212, M. yueqingensis, Microbulbifer sp. Y226, Microbulbifer yueqingensis Zhang et al. 2012, strain Y226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.