STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK14894.1Protein of unknown function. (154 aa)    
Predicted Functional Partners:
SDK14810.1
DNA recombination protein RmuC.
 
     0.821
SDK14859.1
Hypothetical protein.
 
    0.804
SDK23273.1
Hypothetical protein.
  
     0.745
SDK29889.1
Heme-degrading monooxygenase HmoA.
  
     0.729
SDJ97224.1
Hypothetical protein; Non-canonical start codon; manually curated.
  
     0.724
SDK49818.1
Hypothetical protein.
  
 
   0.719
SDJ71564.1
Hypothetical protein.
  
     0.690
SDK69997.1
Hypothetical protein.
  
     0.687
SDJ60118.1
Uncharacterized membrane protein.
  
     0.684
oadG
Oxaloacetate decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
  
     0.683
Your Current Organism:
Microbulbifer yueqingensis
NCBI taxonomy Id: 658219
Other names: CGMCC 1.10658, JCM 17212, M. yueqingensis, Microbulbifer sp. Y226, Microbulbifer yueqingensis Zhang et al. 2012, strain Y226
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