STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK19930.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
SDK19968.1
General secretion pathway protein M.
 
     0.560
SDK19901.1
Protein of unknown function.
       0.512
SDK19997.1
Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
     0.500
SDJ90735.1
Hypothetical protein.
  
     0.493
SDK19870.1
Signal transduction histidine kinase.
       0.416
Your Current Organism:
Microbulbifer yueqingensis
NCBI taxonomy Id: 658219
Other names: CGMCC 1.10658, JCM 17212, M. yueqingensis, Microbulbifer sp. Y226, Microbulbifer yueqingensis Zhang et al. 2012, strain Y226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.