STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMDG_05438Transcription initiation protein SPT3. (316 aa)    
Predicted Functional Partners:
GMDG_05317
TFIID_20kDa domain-containing protein.
    
 0.995
GMDG_07249
SGF29 C-terminal domain-containing protein.
    
 0.995
GMDG_03505
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.995
GMDG_01038
TAF domain-containing protein.
    
 0.994
GMDG_01316
Bromo domain-containing protein.
    
 0.994
GMDG_01930
Uncharacterized protein.
    
 0.994
GMDG_03870
Uncharacterized protein.
   
 0.994
GMDG_02154
Uncharacterized protein.
    
 0.993
GMDG_03801
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.993
GMDG_05036
Uncharacterized protein.
    
 0.992
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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