Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00097 | GMDG_00711 | L8FPV1 | L8GBC9 | Autophagy-related protein. | Uds1 domain-containing protein. | 0.781 |
GMDG_00097 | GMDG_00976 | L8FPV1 | L8FNZ9 | Autophagy-related protein. | Cut12 domain-containing protein. | 0.637 |
GMDG_00097 | GMDG_03391 | L8FPV1 | L8G786 | Autophagy-related protein. | Polyubiquitin. | 0.848 |
GMDG_00240 | GMDG_00976 | L8FWW9 | L8FNZ9 | Metallophos domain-containing protein. | Cut12 domain-containing protein. | 0.602 |
GMDG_00240 | GMDG_01612 | L8FWW9 | L8FZ98 | Metallophos domain-containing protein. | PLK protein kinase. | 0.936 |
GMDG_00240 | GMDG_03391 | L8FWW9 | L8G786 | Metallophos domain-containing protein. | Polyubiquitin. | 0.669 |
GMDG_00240 | GMDG_04867 | L8FWW9 | L8GBN5 | Metallophos domain-containing protein. | Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | 0.977 |
GMDG_00240 | GMDG_06642 | L8FWW9 | L8FUL9 | Metallophos domain-containing protein. | ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family. | 0.408 |
GMDG_00711 | GMDG_00097 | L8GBC9 | L8FPV1 | Uds1 domain-containing protein. | Autophagy-related protein. | 0.781 |
GMDG_00711 | GMDG_00976 | L8GBC9 | L8FNZ9 | Uds1 domain-containing protein. | Cut12 domain-containing protein. | 0.748 |
GMDG_00711 | GMDG_01310 | L8GBC9 | L8FVK8 | Uds1 domain-containing protein. | Pkinase_fungal domain-containing protein. | 0.492 |
GMDG_00711 | GMDG_03391 | L8GBC9 | L8G786 | Uds1 domain-containing protein. | Polyubiquitin. | 0.643 |
GMDG_00711 | GMDG_08155 | L8GBC9 | L8G227 | Uds1 domain-containing protein. | Protein kinase domain-containing protein. | 0.492 |
GMDG_00976 | GMDG_00097 | L8FNZ9 | L8FPV1 | Cut12 domain-containing protein. | Autophagy-related protein. | 0.637 |
GMDG_00976 | GMDG_00240 | L8FNZ9 | L8FWW9 | Cut12 domain-containing protein. | Metallophos domain-containing protein. | 0.602 |
GMDG_00976 | GMDG_00711 | L8FNZ9 | L8GBC9 | Cut12 domain-containing protein. | Uds1 domain-containing protein. | 0.748 |
GMDG_00976 | GMDG_01310 | L8FNZ9 | L8FVK8 | Cut12 domain-containing protein. | Pkinase_fungal domain-containing protein. | 0.569 |
GMDG_00976 | GMDG_01612 | L8FNZ9 | L8FZ98 | Cut12 domain-containing protein. | PLK protein kinase. | 0.768 |
GMDG_00976 | GMDG_03391 | L8FNZ9 | L8G786 | Cut12 domain-containing protein. | Polyubiquitin. | 0.616 |
GMDG_00976 | GMDG_04104 | L8FNZ9 | L8GC65 | Cut12 domain-containing protein. | Serine/threonine-protein phosphatase. | 0.602 |
page 1 of 4