Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00458 | GMDG_00729 | L8G3W4 | L8GD09 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.979 |
GMDG_00458 | GMDG_01350 | L8G3W4 | L8FVP1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.801 |
GMDG_00458 | GMDG_01535 | L8G3W4 | L8FUY5 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.779 |
GMDG_00458 | GMDG_05555 | L8G3W4 | L8FQ08 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Pyruvate carboxyltransferase domain-containing protein. | 0.855 |
GMDG_00458 | GMDG_08254 | L8G3W4 | L8G1U4 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.973 |
GMDG_00458 | GMDG_09045 | L8G3W4 | L8FU13 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein. | 0.864 |
GMDG_00729 | GMDG_00458 | L8GD09 | L8G3W4 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.979 |
GMDG_00729 | GMDG_01350 | L8GD09 | L8FVP1 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.830 |
GMDG_00729 | GMDG_01535 | L8GD09 | L8FUY5 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.808 |
GMDG_00729 | GMDG_05555 | L8GD09 | L8FQ08 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Pyruvate carboxyltransferase domain-containing protein. | 0.841 |
GMDG_00729 | GMDG_08254 | L8GD09 | L8G1U4 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.741 |
GMDG_00729 | GMDG_09045 | L8GD09 | L8FU13 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.875 |
GMDG_01350 | GMDG_00458 | L8FVP1 | L8G3W4 | Uncharacterized protein. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.801 |
GMDG_01350 | GMDG_00729 | L8FVP1 | L8GD09 | Uncharacterized protein. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.830 |
GMDG_01350 | GMDG_01535 | L8FVP1 | L8FUY5 | Uncharacterized protein. | Uncharacterized protein. | 0.842 |
GMDG_01350 | GMDG_02431 | L8FVP1 | L8G312 | Uncharacterized protein. | Dihydroxy-acid dehydratase. | 0.452 |
GMDG_01350 | GMDG_05555 | L8FVP1 | L8FQ08 | Uncharacterized protein. | Pyruvate carboxyltransferase domain-containing protein. | 0.887 |
GMDG_01350 | GMDG_07101 | L8FVP1 | L8FYT0 | Uncharacterized protein. | Dihydroxy-acid dehydratase. | 0.452 |
GMDG_01350 | GMDG_08254 | L8FVP1 | L8G1U4 | Uncharacterized protein. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.830 |
GMDG_01350 | GMDG_09045 | L8FVP1 | L8FU13 | Uncharacterized protein. | Uncharacterized protein. | 0.835 |
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