Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GMDG_00453 | GMDG_02681 | L8G3W0 | L8G4R3 | Homoserine dehydrogenase. | Tryptophan synthase. | 0.943 |
| GMDG_00453 | GMDG_04276 | L8G3W0 | L8G9P6 | Homoserine dehydrogenase. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.503 |
| GMDG_00453 | GMDG_04590 | L8G3W0 | L8GAV0 | Homoserine dehydrogenase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.890 |
| GMDG_00453 | GMDG_04601 | L8G3W0 | L8GC23 | Homoserine dehydrogenase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.863 |
| GMDG_00453 | GMDG_06133 | L8G3W0 | L8FR52 | Homoserine dehydrogenase. | Aminotran_1_2 domain-containing protein. | 0.767 |
| GMDG_00453 | GMDG_08129 | L8G3W0 | L8G2C2 | Homoserine dehydrogenase. | N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.771 |
| GMDG_00453 | GMDG_08845 | L8G3W0 | L8FPC7 | Homoserine dehydrogenase. | S-adenosylmethionine synthetase domain-containing protein. | 0.503 |
| GMDG_01648 | GMDG_03944 | L8FW83 | L8G814 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.892 |
| GMDG_01648 | GMDG_04276 | L8FW83 | L8G9P6 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.470 |
| GMDG_01648 | GMDG_04590 | L8FW83 | L8GAV0 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.516 |
| GMDG_01648 | GMDG_06133 | L8FW83 | L8FR52 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Aminotran_1_2 domain-containing protein. | 0.739 |
| GMDG_01648 | GMDG_06514 | L8FW83 | L8FTX5 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Adenosylmethionine decarboxylase. | 0.465 |
| GMDG_01648 | GMDG_08845 | L8FW83 | L8FPC7 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | S-adenosylmethionine synthetase domain-containing protein. | 0.470 |
| GMDG_02681 | GMDG_00453 | L8G4R3 | L8G3W0 | Tryptophan synthase. | Homoserine dehydrogenase. | 0.943 |
| GMDG_02681 | GMDG_03944 | L8G4R3 | L8G814 | Tryptophan synthase. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.526 |
| GMDG_02681 | GMDG_04276 | L8G4R3 | L8G9P6 | Tryptophan synthase. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.628 |
| GMDG_02681 | GMDG_04590 | L8G4R3 | L8GAV0 | Tryptophan synthase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.580 |
| GMDG_02681 | GMDG_04601 | L8G4R3 | L8GC23 | Tryptophan synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
| GMDG_02681 | GMDG_06133 | L8G4R3 | L8FR52 | Tryptophan synthase. | Aminotran_1_2 domain-containing protein. | 0.890 |
| GMDG_02681 | GMDG_08129 | L8G4R3 | L8G2C2 | Tryptophan synthase. | N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.709 |
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