STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMDG_06136RRM domain-containing protein. (213 aa)    
Predicted Functional Partners:
GMDG_04082
U2 small nuclear ribonucleoprotein A.
   
 0.996
GMDG_06075
Small nuclear ribonucleoprotein F.
   
 0.995
GMDG_01778
Small nuclear ribonucleoprotein Sm D2.
   
 0.995
GMDG_08125
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.995
GMDG_00728
Small nuclear ribonucleoprotein G.
   
 0.995
GMDG_02046
Sm domain-containing protein.
   
 0.994
GMDG_08379
Uncharacterized protein.
    
 0.989
GMDG_07606
Splicing factor 3A subunit 3.
   
 0.987
GMDG_00739
U5 small nuclear ribonucleoprotein component.
   
 
 0.985
GMDG_04206
Uncharacterized protein.
   
 
 0.983
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.