Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00073 | GMDG_00094 | L8FL91 | L8FMM2 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S proteasome regulatory subunit rpn-8. | 0.999 |
GMDG_00073 | GMDG_02227 | L8FL91 | L8G1V5 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S proteasome regulatory subunit N6. | 0.998 |
GMDG_00073 | GMDG_03032 | L8FL91 | L8G4M7 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | PCI domain-containing protein. | 0.915 |
GMDG_00073 | GMDG_05498 | L8FL91 | L8FPM7 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | CSN8_PSD8_EIF3K domain-containing protein. | 0.998 |
GMDG_00073 | GMDG_06146 | L8FL91 | L8FS66 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | Uncharacterized protein. | 0.924 |
GMDG_00073 | GMDG_06941 | L8FL91 | L8FV13 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S protease subunit rpt4; Belongs to the AAA ATPase family. | 0.999 |
GMDG_00073 | GMDG_07063 | L8FL91 | L8FWH5 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.999 |
GMDG_00073 | GMDG_07212 | L8FL91 | L8FZN2 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S proteasome regulatory subunit N11. | 0.999 |
GMDG_00073 | GMDG_07689 | L8FL91 | L8G1R6 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S proteasome regulatory subunit N5. | 0.999 |
GMDG_00073 | GMDG_07898 | L8FL91 | L8FZL2 | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 26S proteasome regulatory subunit T5; Belongs to the AAA ATPase family. | 0.999 |
GMDG_00094 | GMDG_00073 | L8FMM2 | L8FL91 | 26S proteasome regulatory subunit rpn-8. | 26S protease regulatory subunit 8; Belongs to the AAA ATPase family. | 0.999 |
GMDG_00094 | GMDG_02227 | L8FMM2 | L8G1V5 | 26S proteasome regulatory subunit rpn-8. | 26S proteasome regulatory subunit N6. | 0.999 |
GMDG_00094 | GMDG_03032 | L8FMM2 | L8G4M7 | 26S proteasome regulatory subunit rpn-8. | PCI domain-containing protein. | 0.944 |
GMDG_00094 | GMDG_05498 | L8FMM2 | L8FPM7 | 26S proteasome regulatory subunit rpn-8. | CSN8_PSD8_EIF3K domain-containing protein. | 0.999 |
GMDG_00094 | GMDG_06146 | L8FMM2 | L8FS66 | 26S proteasome regulatory subunit rpn-8. | Uncharacterized protein. | 0.913 |
GMDG_00094 | GMDG_06941 | L8FMM2 | L8FV13 | 26S proteasome regulatory subunit rpn-8. | 26S protease subunit rpt4; Belongs to the AAA ATPase family. | 0.999 |
GMDG_00094 | GMDG_07063 | L8FMM2 | L8FWH5 | 26S proteasome regulatory subunit rpn-8. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.999 |
GMDG_00094 | GMDG_07212 | L8FMM2 | L8FZN2 | 26S proteasome regulatory subunit rpn-8. | 26S proteasome regulatory subunit N11. | 0.999 |
GMDG_00094 | GMDG_07689 | L8FMM2 | L8G1R6 | 26S proteasome regulatory subunit rpn-8. | 26S proteasome regulatory subunit N5. | 0.999 |
GMDG_00094 | GMDG_07898 | L8FMM2 | L8FZL2 | 26S proteasome regulatory subunit rpn-8. | 26S proteasome regulatory subunit T5; Belongs to the AAA ATPase family. | 0.999 |
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