STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMDG_06208Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
GMDG_03391
Polyubiquitin.
    
 0.742
GMDG_01346
Ubiquitin-40S ribosomal protein S27a.
    
  0.664
GMDG_02083
BZIP domain-containing protein.
    
  0.664
GMDG_03916
BZIP domain-containing protein.
    
  0.664
GMDG_06711
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.638
GMDG_06002
ANK_REP_REGION domain-containing protein.
    
  0.608
GMDG_01122
Ubiquitin-like domain-containing protein.
    
  0.586
GMDG_06763
Ubiquitin-like domain-containing protein.
    
  0.584
GMDG_08140
Uncharacterized protein.
  
 
   0.582
GMDG_05175
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.552
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.