Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_01637 | GMDG_06460 | L8FW18 | L8FSS4 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | PRA1 family protein. | 0.460 |
GMDG_02655 | GMDG_06460 | L8G3C5 | L8FSS4 | Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | PRA1 family protein. | 0.481 |
GMDG_02655 | TIF34 | L8G3C5 | L8G214 | Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.999 |
GMDG_02655 | TIF35 | L8G3C5 | L8FVB1 | Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | 0.999 |
GMDG_02817 | GMDG_03463 | L8G5K3 | L8G6P9 | Uncharacterized protein. | GTP-binding protein ypt1. | 0.660 |
GMDG_02817 | GMDG_05546 | L8G5K3 | L8FNN3 | Uncharacterized protein. | Uncharacterized protein. | 0.947 |
GMDG_02817 | GMDG_06460 | L8G5K3 | L8FSS4 | Uncharacterized protein. | PRA1 family protein. | 0.687 |
GMDG_02817 | GMDG_06608 | L8G5K3 | L8FWV2 | Uncharacterized protein. | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | 0.404 |
GMDG_03288 | GMDG_06460 | L8G685 | L8FSS4 | Reticulon-like protein. | PRA1 family protein. | 0.495 |
GMDG_03463 | GMDG_02817 | L8G6P9 | L8G5K3 | GTP-binding protein ypt1. | Uncharacterized protein. | 0.660 |
GMDG_03463 | GMDG_05546 | L8G6P9 | L8FNN3 | GTP-binding protein ypt1. | Uncharacterized protein. | 0.861 |
GMDG_03463 | GMDG_06460 | L8G6P9 | L8FSS4 | GTP-binding protein ypt1. | PRA1 family protein. | 0.477 |
GMDG_03463 | GMDG_06608 | L8G6P9 | L8FWV2 | GTP-binding protein ypt1. | Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. | 0.695 |
GMDG_03775 | GMDG_06460 | L8G982 | L8FSS4 | Uncharacterized protein. | PRA1 family protein. | 0.496 |
GMDG_05546 | GMDG_02817 | L8FNN3 | L8G5K3 | Uncharacterized protein. | Uncharacterized protein. | 0.947 |
GMDG_05546 | GMDG_03463 | L8FNN3 | L8G6P9 | Uncharacterized protein. | GTP-binding protein ypt1. | 0.861 |
GMDG_05546 | GMDG_06460 | L8FNN3 | L8FSS4 | Uncharacterized protein. | PRA1 family protein. | 0.608 |
GMDG_06460 | GMDG_01637 | L8FSS4 | L8FW18 | PRA1 family protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.460 |
GMDG_06460 | GMDG_02655 | L8FSS4 | L8G3C5 | PRA1 family protein. | Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.481 |
GMDG_06460 | GMDG_02817 | L8FSS4 | L8G5K3 | PRA1 family protein. | Uncharacterized protein. | 0.687 |
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