Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_01001 | GMDG_04162 | L8FP22 | L8GCB5 | Actin. | Uncharacterized protein. | 0.953 |
GMDG_01001 | GMDG_05805 | L8FP22 | L8FPP2 | Actin. | Elongation factor EF-3. | 0.602 |
GMDG_01001 | GMDG_06524 | L8FP22 | L8FTZ7 | Actin. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.600 |
GMDG_01366 | GMDG_04020 | L8FSI7 | L8G898 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.945 |
GMDG_01366 | GMDG_04939 | L8FSI7 | L8GC87 | Uncharacterized protein. | NUC153 domain-containing protein. | 0.766 |
GMDG_01366 | GMDG_05656 | L8FSI7 | L8FP93 | Uncharacterized protein. | Uncharacterized protein. | 0.482 |
GMDG_01366 | GMDG_05805 | L8FSI7 | L8FPP2 | Uncharacterized protein. | Elongation factor EF-3. | 0.765 |
GMDG_01366 | GMDG_06524 | L8FSI7 | L8FTZ7 | Uncharacterized protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.456 |
GMDG_01366 | GMDG_06949 | L8FSI7 | L8FUT6 | Uncharacterized protein. | Uncharacterized protein. | 0.762 |
GMDG_01835 | GMDG_06524 | L8FXF7 | L8FTZ7 | HECT domain-containing protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.569 |
GMDG_04020 | GMDG_01366 | L8G898 | L8FSI7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.945 |
GMDG_04020 | GMDG_04939 | L8G898 | L8GC87 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | NUC153 domain-containing protein. | 0.939 |
GMDG_04020 | GMDG_05656 | L8G898 | L8FP93 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.541 |
GMDG_04020 | GMDG_05805 | L8G898 | L8FPP2 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Elongation factor EF-3. | 0.959 |
GMDG_04020 | GMDG_05944 | L8G898 | L8FTU4 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.556 |
GMDG_04020 | GMDG_06524 | L8G898 | L8FTZ7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.438 |
GMDG_04020 | GMDG_06949 | L8G898 | L8FUT6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.988 |
GMDG_04162 | GMDG_01001 | L8GCB5 | L8FP22 | Uncharacterized protein. | Actin. | 0.953 |
GMDG_04162 | GMDG_06524 | L8GCB5 | L8FTZ7 | Uncharacterized protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.541 |
GMDG_04939 | GMDG_01366 | L8GC87 | L8FSI7 | NUC153 domain-containing protein. | Uncharacterized protein. | 0.766 |
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