Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00242 | GMDG_01867 | L8FVI9 | L8FZ19 | Uncharacterized protein. | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | 0.763 |
GMDG_00242 | GMDG_03351 | L8FVI9 | L8G600 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
GMDG_00242 | GMDG_03391 | L8FVI9 | L8G786 | Uncharacterized protein. | Polyubiquitin. | 0.958 |
GMDG_00242 | GMDG_05627 | L8FVI9 | L8FQB7 | Uncharacterized protein. | Serine/threonine-protein phosphatase. | 0.561 |
GMDG_00242 | GMDG_06711 | L8FVI9 | L8FUW0 | Uncharacterized protein. | Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. | 0.688 |
GMDG_00242 | GMDG_06763 | L8FVI9 | L8FU04 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.945 |
GMDG_00242 | GMDG_06776 | L8FVI9 | L8FU25 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
GMDG_00242 | GMDG_07162 | L8FVI9 | L8FVZ1 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.915 |
GMDG_01867 | GMDG_00242 | L8FZ19 | L8FVI9 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Uncharacterized protein. | 0.763 |
GMDG_01867 | GMDG_03205 | L8FZ19 | L8G8Z0 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. | 0.785 |
GMDG_01867 | GMDG_03351 | L8FZ19 | L8G600 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Uncharacterized protein. | 0.621 |
GMDG_01867 | GMDG_03391 | L8FZ19 | L8G786 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Polyubiquitin. | 0.830 |
GMDG_01867 | GMDG_06711 | L8FZ19 | L8FUW0 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. | 0.534 |
GMDG_01867 | GMDG_06763 | L8FZ19 | L8FU04 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Ubiquitin-like domain-containing protein. | 0.672 |
GMDG_01867 | GMDG_06776 | L8FZ19 | L8FU25 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Uncharacterized protein. | 0.621 |
GMDG_01867 | GMDG_07162 | L8FZ19 | L8FVZ1 | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | Ubiquitin-like domain-containing protein. | 0.967 |
GMDG_03205 | GMDG_01867 | L8G8Z0 | L8FZ19 | E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. | Skp1_POZ domain-containing protein; Belongs to the SKP1 family. | 0.785 |
GMDG_03205 | GMDG_03351 | L8G8Z0 | L8G600 | E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. | Uncharacterized protein. | 0.612 |
GMDG_03205 | GMDG_03391 | L8G8Z0 | L8G786 | E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. | Polyubiquitin. | 0.958 |
GMDG_03205 | GMDG_05627 | L8G8Z0 | L8FQB7 | E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. | Serine/threonine-protein phosphatase. | 0.566 |
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