Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GMDG_00849 | GMDG_01330 | L8GBI1 | L8FVM4 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.956 |
GMDG_00849 | GMDG_01438 | L8GBI1 | L8FUD7 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Uncharacterized protein. | 0.763 |
GMDG_00849 | GMDG_02052 | L8GBI1 | L8G0L4 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Bifunctional purine biosynthesis protein ADE17. | 0.988 |
GMDG_00849 | GMDG_03617 | L8GBI1 | L8GAH3 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Formyl_trans_N domain-containing protein. | 0.850 |
GMDG_00849 | GMDG_04141 | L8GBI1 | L8G8V8 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Phosphoribosylglycinamide formyltransferase. | 0.995 |
GMDG_00849 | GMDG_04232 | L8GBI1 | L8GCH5 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Uncharacterized protein. | 0.974 |
GMDG_00849 | GMDG_05696 | L8GBI1 | L8FPD2 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Uncharacterized protein. | 0.940 |
GMDG_00849 | GMDG_07557 | L8GBI1 | L8FYV0 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.956 |
GMDG_00849 | GMDG_07723 | L8GBI1 | L8FYS6 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Uncharacterized protein. | 0.902 |
GMDG_00849 | GMDG_08981 | L8GBI1 | L8FWD8 | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | Uncharacterized protein. | 0.902 |
GMDG_01330 | GMDG_00849 | L8FVM4 | L8GBI1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase. | 0.956 |
GMDG_01330 | GMDG_01438 | L8FVM4 | L8FUD7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.832 |
GMDG_01330 | GMDG_02052 | L8FVM4 | L8G0L4 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Bifunctional purine biosynthesis protein ADE17. | 0.962 |
GMDG_01330 | GMDG_03617 | L8FVM4 | L8GAH3 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Formyl_trans_N domain-containing protein. | 0.822 |
GMDG_01330 | GMDG_04141 | L8FVM4 | L8G8V8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Phosphoribosylglycinamide formyltransferase. | 0.926 |
GMDG_01330 | GMDG_04232 | L8FVM4 | L8GCH5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.924 |
GMDG_01330 | GMDG_05696 | L8FVM4 | L8FPD2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.961 |
GMDG_01330 | GMDG_07557 | L8FVM4 | L8FYV0 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.736 |
GMDG_01330 | GMDG_07723 | L8FVM4 | L8FYS6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.888 |
GMDG_01330 | GMDG_08981 | L8FVM4 | L8FWD8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.888 |
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