STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMDG_06219Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
GMDG_00157
zf-C3H1 domain-containing protein.
    
 
 0.782
GMDG_00952
Uncharacterized protein.
    
 
 0.724
GMDG_04665
HRDC domain-containing protein.
    
 
 0.624
GMDG_05423
NodB homology domain-containing protein.
   
 
 0.621
GMDG_04694
NodB homology domain-containing protein.
   
 
 0.621
GMDG_01410
Uncharacterized protein.
    
 
 0.588
GMDG_00858
RRM domain-containing protein.
    
 
 0.566
GMDG_08433
ATP-dependent RNA helicase DOB1.
    
 
 0.555
GMDG_07913
RRM domain-containing protein.
    
 
 0.550
GMDG_06889
Uncharacterized protein.
    
 
 0.534
Your Current Organism:
Pseudogymnoascus destructans
NCBI taxonomy Id: 658429
Other names: Geomyces destructans 20631-21, P. destructans 20631-21, Pseudogymnoascus destructans 20631-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.