Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | GMDG_00487 | L8FT87 | L8G6X5 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.996 |
ERB1 | GMDG_00584 | L8FT87 | L8GAA6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA helicase. | 0.998 |
ERB1 | GMDG_01470 | L8FT87 | L8FV28 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.993 |
ERB1 | GMDG_03637 | L8FT87 | L8GAJ2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RRM domain-containing protein. | 0.980 |
ERB1 | GMDG_04260 | L8FT87 | L8GCJ7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.999 |
ERB1 | GMDG_05393 | L8FT87 | L8FRI3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.996 |
ERB1 | GMDG_05826 | L8FT87 | L8FQZ4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.920 |
ERB1 | GMDG_06963 | L8FT87 | L8FW24 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.996 |
ERB1 | GMDG_07525 | L8FT87 | L8FXW9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.994 |
ERB1 | YTM1 | L8FT87 | L8FLY0 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
GMDG_00487 | ERB1 | L8G6X5 | L8FT87 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
GMDG_00487 | GMDG_00584 | L8G6X5 | L8GAA6 | Uncharacterized protein. | RNA helicase. | 0.993 |
GMDG_00487 | GMDG_01470 | L8G6X5 | L8FV28 | Uncharacterized protein. | Uncharacterized protein. | 0.993 |
GMDG_00487 | GMDG_03637 | L8G6X5 | L8GAJ2 | Uncharacterized protein. | RRM domain-containing protein. | 0.996 |
GMDG_00487 | GMDG_04260 | L8G6X5 | L8GCJ7 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.996 |
GMDG_00487 | GMDG_05393 | L8G6X5 | L8FRI3 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
GMDG_00487 | GMDG_05826 | L8G6X5 | L8FQZ4 | Uncharacterized protein. | Uncharacterized protein. | 0.924 |
GMDG_00487 | GMDG_06963 | L8G6X5 | L8FW24 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
GMDG_00487 | GMDG_07525 | L8G6X5 | L8FXW9 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.993 |
GMDG_00487 | YTM1 | L8G6X5 | L8FLY0 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.987 |
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